NEBNext rRNA Depletion Kit (Bacteria) Species compatibility
This table includes species compatibility information available to date.
■ = Yes. ■* = Yes. Note that efficiency of depletion may vary depending on sample ■ = Limited ■ = No
| COMPATIBILITY REPORTED | ||||
|---|---|---|---|---|
| NEB DATA | USER DATA | |||
| Organism | Community | Monoculture | Community | Monoculture |
| Acinetobacter | ■ | |||
| Acinetobacter baumannii (ATCC 17978) | ■ | ■* | ||
| Acetobacterium woodii | ■* | |||
| Actinomyces odontolyticus (ATCC 17982) | ■ | |||
| Akkermansia muciniphila | ■ | |||
| Bacillus | ■ | |||
| Bacillus cereus (ATCC 10987) | ■ | |||
| Bacillus megaterium | ■ | |||
| Bacteroides fragilis | ■* | |||
| Bacteroides thetaiotaomicron | ■* | |||
| Bacteroides uniformis | ■* | |||
| Bacteroides vulgatus (ATCC 8482) | ■ | ■* | ||
| Bifidobacterium adolescentis (ATCC 15703) | ■ | ■ | ||
| Bifidobacterium longum | ■* | |||
| Blautia obeum | ■* | |||
| Coprococcus comes | ■ | |||
| Clostridium beijerinckii (ATCC 35702) | ■ | |||
| Clostridium bolteae | ■ | |||
| Clostridium perfringes | ■ | |||
| Clostridium phytofermentans | ■ | |||
| Clostridium saccharolyticum | ■ | |||
| Colinsella aerofaciens | ■* | |||
| Cutibacterium acnes (ATCC 11828) | ■ | |||
| Deinococcus radiodurans (ATCC BAA-816) | ■ | |||
| Dorea formicigenerans | ■* | |||
| Enterococcus faecalis (ATCC 47077) | ■ | |||
| Escherichia coli (ATCC 700926) | ■ | ■ | ■ | |
| Escherichia-Shigella | ■ | |||
| Eubacterium rectale | ■ | |||
| Fusobacterium nucleatum | ■ | |||
| Helicobacter pylori (ATCC 700392) | ■ | |||
| Halalkalicoccus jeotgali | ■ | |||
| Janthinobacterium lividum | ■ | |||
| Lactobacillus gasseri (ATCC 33323) | ■ | |||
| Lactococcus lactis | ■ | |||
| Lactobacillus paracasei | ■ | |||
| Moorella thermoacetica | ■* | |||
| Mycobacterium Smegmatis | ■* | |||
| Neisseria meningitidis (ATCC BAA-335) | ■ | |||
| Odoribacter splanchnicus | ■ | |||
| Parabacteroides merdae | ■ | |||
| Parabacteroides distasonis | ■ | |||
| Porphyromonas gingivalis (ATCC 33277) | ■ | |||
| Prevotella copri | ■* | |||
| Pseudomonas aeruginosa (ATCC 9027) | ■ | |||
| Rhodobacter sphaeroides (ATCC 17029) | ■ | |||
| Roseburia intestinalis | ■ | |||
| Rubrivivax | ■ | |||
| Ruminococcus bromii | ■ | |||
| Ruminococcus gnavus | ■ | |||
| Ruminococcus torques | ■ | |||
| Salmonella enterica | ■ | |||
| Sporomusa ovata | ■* | |||
| Staphylococcus aureus (ATCC BAA-1556) | ■ | |||
| Staphylococcus epidermidis (ATCC 12228) | ■ | ■ | ||
| Streptococcus agalactiae (ATCC BAA-611) | ■ | |||
| Streptococcus mutans (ATCC 700610) | ■ | |||
| Streptococcus parasanguinis | ■ | |||
| Thermoanaerobacter kivui | ■* | |||
| Veillonella parvula | ■ | |||
| Vibrio cholerae | ■ | |||
